CUBIC-Atlas and CUBIC-Cloud data
Some of the reference data reported in CUBIC-Atlas and CUBIC-Cloud paper is provided here.
Downloads
CUBIC-Atlas
CUBIC-Atlas is distributed under Creative Commons BY-NC-ND 4.0 license.
- CUBIC-Atlas (version 1.2)
- Regional cell counts of 8-week-old C57BL6N mouse brains n=3 (NatProtoc. 2019, Fig. 8e) and atlas n=1
- CUBIC-Atlas (version 1.1)
- CUBIC-Atlas (version 1.0)
CUBIC-Informatics test data
CUBIC-Cloud
- PV immunostaining whole-brain data
- SST immunostaining whole-brain data
- ChAT immunostaining whole-brain data
- Th immunostaining whole-brain data
- Iba1 immunostaining whole-brain data (LPS injection)
- 6E10 immunostaining whole-brain data (APP(NL-G-F) tg-mouse)
- c-Fos immunostaining whole-brain data (LPS injection)
- c-Fos immunostaining whole-brain data (MK-801 injection)
- Rabies virus-based monosynaptic tracing whole-brain data (Injection to ARH of Kiss1-Cre mouse)
ecc demo data
Publications
For the details of CUBIC-Atlas and CUBIC-Cloud software/data, please refer to the following papers
- Murakami et al., Nature Neuroscience (2018) (version 1.0 was reported here)
- Matsumoto et al., Nature Protocols (2019) (version 1.2 was reported here)
- Mano et al., bioRxiv (2020) (version 1.1 was reported here)